JAMC

Article http://dx.doi.org/10.26855/jamc.2026.03.002

Dynamic Characteristics and Synergistic Effect of Gaussian White Noise and Color Noise in Gene Transcription Regulation System

TOTAL VIEWS: 217

Yan Fu1, Yu Gao1, Shujun Bi1, Juan Zeng1, Wenjing Wang1, Yumeng Zhang1, Guowei Wang2,3,*

1School of Computer and Mathematics, Yuzhang Normal University, Nanchang 330103, Jiangxi, China.

2School of Aeronautical Mechanical and Electrical Engineering, Jiangxi Flight University, Nanchang 330024, Jiangxi, China.

3School of Education, Nanchang Institute of Science and Technology, Nanchang 330044, Jiangxi, China.

*Corresponding author:Guowei Wang

This work was supported by the College Student Innovation Training Program Project of Jiangxi Provincial (S202413774018), Natural Science Foundation of Jiangxi Provincial (20232BAB201048), and Senior Talent In-troduction Project of Jiangxi Flight University.
Published: March 4,2026

Abstract

This research employs the Fox approximation method and Novikov’s theorem to derive the Fokker-Planck equation of gene transcriptional regulatory systems, thus random dynamical characteristics and synergistic effect of cross-correlated Gaussian colored noise and white noise on the system are investigated. Specifically, the effects of noise intensity and correlation time on the steady-state probability distribution and the mean first passage time of the system are analyzed through numerical simulation. The obtained results indicate that auto-correlation time and cross-correlation time can serve as crucial parameters in regulating gene switching states. Noise intensity, correlation time, and correlation strength can exert significant regulatory effects on the steady-state probability distribution function of the gene transcription regulatory system. Meanwhile, a study on the mean first passage time reveals that correlation strength and correlation time play complex roles in gene transcription, sometimes exhibiting equivalent effects, while other times acting in opposition. Under different correlation conditions, protein concentration transitions display intricate dynamical behaviors, such as re-recording phenomena. This research proposes regulating gene states through changes in protein concentration, providing new insights for the design of genetic drugs.

Keywords

Gene transcriptional; Regulatory system; Cross-correlated; Steady-state probability distribution; Mean first passage time

References

[1] Xi B, Guo YF, Shen YJ, Tan JG, Liu M. Multiplicative non-Gaussian noise and additive Gaussian white noise induced transition in a piecewise nonlinear model. Chin J Phys. 2017;55(1):1-9.

[2] Wu J. Random resonance dynamics of a class of gene switch synthesis network systems. Electronic Industry Press; 2020.

[3] Mi LN, Guo YF, Zhang M, Zhuo XJ. Stochastic resonance in gene transcriptional regulatory system driven by Gaussian noise and Lévy noise. Chaos Solitons Fractals. 2023;167:113096.

[4] Zhou WS, Xu D. Microwave magnetic resonance in reentrant spin glass spinel CoxZn1-x(FeyCr1-y)2O4. Acta Phys Sin. 1992;41(12):2043-8.

[5] Jin YF, Wang HT, Xu PF. Noise-induced enhancement of stability and resonance in a tri-stable system with time-delayed feedback. Chaos Solitons Fractals. 2023;168:113099.

[6] Xu W, Qi LY, Gao WT. Effects of noises and habitat complexity in the prey- predator ecosystem. Appl Math Mech. 2013;34(2):162-71.

[7] Featherstone K, White MRH, Davis JRE, et al. The prolactin gene: a paradigm of tissue-specific gene regulation with complex temporal transcription dynamics. J Neuroendocrinol. 2012;24(7):977-90.

[8] Whitelaw NC, Chong S, Morgan DK, et al. Reduced levels of two modifiers of epigenetic gene silencing, Dnmt3a and Trim28, cause increased phenotypic noise. Genome Biol. 2010;11(11):111.

[9] Maggi C, Marconi UMB, Gnan N, et al. Multidimensional stationary probability distribution for interacting active particles. Sci Rep. 2014;5:10742.

[10] Duan WL, Fang H. The unified colored noise approximation of multidimensional stochastic dynamic system. Physica A. 2020;555:124624.

[11] Jia WT, Feng XT, Zhao YF, Zan WR. Dynamical system response under Gaussian and Poisson white noises solved by deep neural network method with adaptive task decomposition and progressive learning strategy. Phys Rev E. 2025;111(4-2):045309.

[12] Wang CJ, Mei DC. Effect of colored cross-correlated noise on the gene transcriptional regulatory system. Acta Phys Sin. 2008;57(07):3983-8.

[13] Cao HL, Li YM, Tang XH. Calculation and analysis of black carbon emissions from aircraft full flight phase based on QAR data. Acta Sci Circumstantiae. 2020;40(6):1951-7.

[14] Guo YF, Wang LJ, Wei F, Tan JG. Dynamical behavior of simplified FitzHugh-Nagumo neural system driven by Lévy noise and Gaussian white noise. Chaos Solitons Fractals. 2019;127:118-26.

[15] Yang YG, He LL, Zeng YH, Sun YH, Xu W. Stochastic analysis of a time-delayed viscoelastic energy harvester subjected to narrow-band noise. Int J Non Linear Mech. 2022;147:104230.

[16] Han DY, Su X, Shi PM. Stochastic resonance in multi-stable system driven by Lévy noise. Chin J Phys. 2018;56(4):1559-69.

[17] Munsky B, Neuert G, van Oudenaarden A, et al. Using gene expression noise to understand gene regulation. Science. 2012;336(6078):183-7.

[18] Sun QW, Jiao F, Yu JS. The dynamics of gene transcription with a periodic synthesis rate. Nonlinear Dyn. 2021;104(4):4477-92.

[19] Liu XM, Wen DH, Xie HZ, Gao YN. Effects of Additive and Multiplicative Noises on Gene Transcription Regulation. J South China Univ Technol (Nat Sci Ed). 2009;37(7):132-4.

[20] Zhang M, Guo YF, Liu QR. Steady-state Analysis of the Gene Transcriptional Regulation System Under the Double-noise Excitation. Complex Syst Complex Sci. 2023;20(2):38-42, 67.

[21] Smolen P, Baxter DA, Byrne JH. Frequency selectivity, multistability and oscillations emerge from models of genetic regulatory systems. Am J Physiol. 1998;274:C531-42.

[22] Smolen P, Baxter DA, Byrne JH. Effects of macromolecular transport and stochastic fluctuations on dynamics of genetic regulatory systems. Am J Physiol. 1999;277:C777-90.

[23] Tang MX. The mean and noise of stochastic gene transcription. J Theor Biol. 2008;253(2):271-80.

[24] Schwabe A, Rybakova KN, Bruggeman FJ. Transcription Stochasticity of complex gene regulation models. Biophys J. 2012;103(6):1152-61.

[25] Song QZ, Mi LN, Zhang M, Guo YF. The switch behavior in a gene transcription regulation system driven by Lévy noise and Gaussian noise. Fluct Noise Lett. 2025;24(03):50018X.

[26] Jin YF, Wang HT, Xu PF. Noise-induced enhancement of stability and resonance in a tri-stable system with time-delayed feedback. Chaos Solitons Fractals. 2023;168:113099.

[27] Guo YF, Ding JX, Mi LA. Statistical complexity and stochastic resonance of an underdamped bistable periodic potential system excited by Levy noise. Chaos Solitons Fractals. 2024;179:114380.

[28] Fiasconaro A, Ochab-Marcinek A, Spagnolo B, Gudowska-Nowak E. Monitoring noise-resonant effects in cancer growth influenced by external fluctuations and periodic treatment. J Stat Mech Theory Exp. 2008;2008:P03004.

[29] Hao ML, Xu W, Gu XD, Qi LY. Effects of Levy noise and immune delay on the extinction behavior in a tumor growth model. Chin Phys B. 2014;23(9):090501.

[30] Li DX, Yang YC. Impact of time delay on population model with Allee effect. Commun Nonlinear Sci Numer Simul. 2019;72:282-93.

[31] Zeng CH, Chen LL, Xie CW. Stochastic resonance in a bistable system subject to non-Gaussian and Gaussian noises. Commun Theor Phys. 2008;50(5):1165-8.

[32] Lou XJ, Guo YF, Dong Q, Wei Y. First-passage behavior of periodic potential system driven by correlated noise. Chin J Phys. 2020;68:270-83.

[33] Wang M, Fang YW, Luo YH, Yang FZ, Zeng CH, Duan WL. Influence of non-Gaussian noise on the coherent feed-forward loop with time delay. Chaos Solitons Fractals. 2019;129:46-55.

[34] Zhang G, Liu YL, He LF. Stochastic resonance of an asymmetric tristable system driven by cross-correlated Ornstein-Uhlenbeck noise. Chin J Phys. 2022;77:1405-18.

[35] Liu Q, Jia Y. Fluctuations-induced switch in the gene transcriptional regulatory system. Phys Rev E. 2004;70:041907.

[36] Wang CJ, Mei DC. Effect of colored cross-correlated noise on the gene transcriptional regulatory system. Acta Phys Sin. 2008;57:3983-8.

[37] Wang JY, Zhu CL, Jia Y, et al. Effects of nonlinear time-delay on a stochastic asymmetric system. Chin Phys Lett. 2007;23:1398-401.

[38] Wang JW, Zhang JJ, Yuan ZJ, et al. Noise-induced switches in network systems of the genetic toggle switch. BMC Syst Biol. 2007;1:50.

[39] Bai CY, Yan Y, Mei DC. Stochastic resonance induced by a multiplicative periodic signal in the gene transcriptional regulatory system with correlated noises. Chin Phys B. 2010;19:060503.

[40] Berridge MJ, Bootman MD, Lipp P. Calcium—a life and death signal. Nature. 1998;395:645-8.

[41] Parekh AB. Decoding cytosolic Ca2+ oscillations. Trends Biochem Sci. 2011;36:78-87.

How to cite this paper

Dynamic Characteristics and Synergistic Effect of Gaussian White Noise and Color Noise in Gene Transcription Regulation System

How to cite this paper: Yan Fu, Yu Gao, Shujun Bi, Juan Zeng, Wenjing Wang, Yumeng Zhang, Guowei Wang. (2026) Dynamic Characteristics and Synergistic Effect of Gaussian White Noise and Color Noise in Gene Transcription Regulation System. Journal of Applied Mathematics and Computation10(1), 7-20.

DOI: http://dx.doi.org/10.26855/jamc.2026.03.002